Selected Publications
Inferring causal cell types in diseases and complex traits
Amariuta T., Siewert-Rocks, K., Price, A.L. Modeling tissue co-regulation to estimate tissue-specific contributions to disease. bioRxiv, https://www.biorxiv.org/content/10.1101/2022.08.25.505354v1
Trans-ancestry portability of genetic association data
Amariuta, T.*, Ishigaki, K.*, Sugishita, H., Ohta, T., Koido, M., Dey, K. K., Matsuda, K., Murakami, Y., Price, A. L., Kawakami, E., Terao, C. & Raychaudhuri, S. Improving the trans-ancestry portability of polygenic risk scores by prioritizing variants in predicted cell-type-specific regulatory elements. Nat. Genet. 52, 1346–1354 (2020) * indicates equal contributions
Cell-type-specific enhancer predictions
Amariuta, T., Luo, Y., Gazal, S., Davenport, E. E., van de Geijn, B., Ishigaki, K., Westra, H.-J., Teslovich, N., Okada, Y., Yamamoto, K., …, Price, A. L., Raychaudhuri, S. IMPACT: Genomic annotation of cell-state-specific regulatory elements inferred from the epigenome of bound transcription factors. Am. J. Hum. Genet. 104, 879–895 (2019).
Review article on advances in rheumatoid arthritis genetics
Amariuta, T., Luo, Y., Knevel, R., Okada, Y., Raychaudhuri, S. Advances in genetics toward identifying and profiling pathogenic cell states of rheumatoid arthritis. Immunol. Rev. (2019).
A full list of Dr. Amariuta's publications can be found here: